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|Restrictions to use||None|
|Database management system||MySQL|
|User data submission||Not allowed|
Publications for EuroPhenome
Semantically enabling a genome wide association study database
[…] (E-Utilities) ESearch service  is used to validate the given list and retrieve Entrez IDs for the genes. The gene symbols for the mouse orthologs are retrieved from the MGI BioMart . The MGI and EuroPhenome BioMarts are accessed to retrieve the MPO terms annotated to the mouse ortholog gene list. The GWAS Central REST web service is accessed to retrieve the phenotype annotations for the human […]
Anatomy ontologies and potential users: bridging the gap
[…] lar Biology Laboratory, Biotechnology and Biological Sciences Research Council (grant #BB/G022755/1), Medical Research Council, European Commission’s FP6 Programme (contract #LSHG-CT-2006-037188) for EuroPhenome as part of the EUMODIC project.This article has been published as part of Journal of Biomedical Semantics Volume 2 Supplement 4, 2011: Proceedings of Ontologies in Biomedicine and Life Sci […]
Towards the integration of mouse databases definition and implementation of solutions to two use cases in mouse functional genomics
[…] databases represent single project outputs and are maintained at different sites. Exceptions are, for example, the mouse genome database (MGD) database of MGI , the mouse phenome database (MPD) , Europhenome  and the GeneNetwork database , which have collected information from many different sources. MGD is a database which has been optimized for researchers in the field of mouse functiona […]
Mouse, man, and meaning: bridging the semantics of mouse phenotype and human disease
[…] EMPReSS database (Green et al. ) (http://empress.har.mrc.ac.uk/), which contains all the EUMORPHIA SOPs in a structured form. Data from EUMORPHIA, and subsequently EUMODIC, have been collected in the EuroPhenome database (Mallon et al. ) (http://www.europhenome.org).Of course, these high-throughput approaches are of value only if complemented by the gathering of more detailed information on lines […]
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