EvoDesign pipeline

EvoDesign specifications


Unique identifier OMICS_10811
Name EvoDesign
Interface Web user interface
Restrictions to use None
Input data Scaffold structure (C-alpha only or full-atomic)
Input format PDB format
Computer skills Basic
Stability Stable
Maintained Yes


  • person_outline Yang Zhang <>

Publication for EvoDesign

EvoDesign IN pipeline

PMCID: 3812052
PMID: 24204234
DOI: 10.1371/journal.pcbi.1003298

[…] in eqs 1 and 2 (w1–5) were determined on a set of 625 non-redundant training proteins that are non-homologous to the test set and case study proteins (see http://zhanglab.ccmb.med.umich.edu/evodesign/list625.txt). for w1–3 in eq. 1, the weights are decided by the relative accuracy of the individual feature predictions, i.e. w1 = c*ass, w2 = c*asa, w3 = c*ata, where ass, asa and ata […]

EvoDesign institution(s)
Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI, USA

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