EvolView specifications

Information


Unique identifier OMICS_04252
Interface Web user interface
Restrictions to use None
Computer skills Basic
Version 2.0
Stability Stable
Registration required Yes
Maintained Yes

Documentation


Maintainer


  • person_outline Songnian Hu <>

Additional information


https://github.com/evolgeniusteam/EvolviewDocumentation

EvolView articles

EvolView citations

 (3)
2018
PMCID: 5932348

[…] multiple sequence alignments were performed using clustalw. phylogentic trees were generated using the maximum-likelihood method in phyml version 3.1. phylogenetic trees were annotated using evolview (http://www.evolgenius.info/evolview/#login) (he et al., 2016)., leptospira interrogans strain lai 56601 was obtained from the national institute for the control of pharmaceutical […]

2016
PMCID: 4756857

[…] the phylogenetic relationships for the 21 species using the default jtt model with 100 bootstrap iterations. the resulting species tree can be found in supplementary table s14 and visualized using evolview (35)., ncrnas are abundantly expressed in m. pneumoniae (supplementary figure s3). the majority (236 out of 311; 76%) of the ncrnas are antisense to protein-coding genes, suggesting putative […]

2016
PMCID: 4705811

[…] used in the tree construction were amino: poisson correction model plus uniform rates determined by pairwise deletion and 1,000 bootstraps. the trees were visualized using the online tool, evolview [81]. protein motifs were annotated using interpro 51.0 [49] and visualized in dog2.0.1 (http://dog.biocuckoo.org/) [62]., the normalized expression levels of tomato genes, based on rna-seq […]

EvolView institution(s)
CAS Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics (BIG), Chinese Academy of Sciences (CAS), Beijing, China; University of Chinese Academy of Sciences, Beijing, China; Institute for Computer Science and Cluster of Excellence on Plant Sciences CEPLAS, Heinrich Heine University, D├╝sseldorf, Germany; BIG Data Center, Beijing Institute of Genomics (BIG), Chinese Academy of Sciences (CAS), Beijing, China

EvolView review

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Johanna Nelkner

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Web
What an awesome tool!!! I fell in love with it. I could simply upload my newick file and then make the tree look as nice as possible by increasing or decreasing horizotntal or vertical scale, show or hide branch length values, and most important of all: YOU CAN REROOT THE TREE AS YOU LIKE

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