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eXamine

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A set-oriented visual analysis approach for annotated modules that displays set membership as contours on top of a node-link layout. eXamine extends upon Self Organizing Maps to simultaneously lay out nodes, links, and set contours.

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eXamine classification

eXamine specifications

Software type:
Package/Module
Restrictions to use:
None
Programming languages:
Java
Computer skills:
Medium
Stability:
Stable
Maintained:
Yes
Interface:
Graphical user interface
Operating system:
Unix/Linux, Mac OS, Windows
License:
GNU General Public License version 2.0
Version:
2.0
Requirements:
Cytoscape

eXamine support

Documentation

Maintainer

  • Michel A. Westenberg <>

Credits

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Publications

Institution(s)

Eindhoven University of Technology, MB, Eindhoven, Netherlands; Life Sciences, Centrum Wiskunde & Informatica (CWI), Amsterdam, Netherlands; VU University Amsterdam, Amsterdam, Netherlands

Link to literature

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.