XHMM specifications

Unique identifier:
OMICS_03956
Software type:
Toolkit/Suite
Restrictions to use:
None
Programming languages:
C++
Computer skills:
Advanced
Requirements:
gcc, pthread, lapack, Gengetopt
Name:
eXome-Hidden Markov Model
Interface:
Command line interface
Operating system:
Unix/Linux
License:
GNU General Public License version 3.0
Stability:
Stable
Maintained:
Yes

versioning

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No versioning.

XHMM distribution

download

XHMM support

Maintainers

  • Shaun Purcell <>
  • Menachem Fromer <>

forum

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No open topic.

Credits

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Publications

Institution(s)

Division of Psychiatric Genomics, Mount Sinai School of Medicine, New York, NY, USA; Stanley Center for Psychiatric Research, Broad Institute, Cambridge, MA, USA; Program in Medical and Population Genetics, The Broad Institute of Harvard and MIT, Cambridge, MA, USA; Analytic and Translational Genetics Unit, Department of Medicine, Massachusetts General Hospital and Harvard Medical School, Boston, MA, USA; Center for Human Genetics Research, Massachusetts General Hospital, Boston, MA, USA; Department of Genetics, Harvard Medical School, Boston, MA, USA; Department of Psychological Medicine and Neurology, Medical Research Council Centre for Neuropsychiatric Genetics and Genomics, School of Medicine, Neuroscience and Mental Health Research Institute, Cardiff University, Cardiff, UK; Department of Genetics, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA; Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden

Funding source(s)

Supported by National Institute of Health grants RC2MH089905 and R01HG005827 and by the Sylvan Herman Foundation.

User review

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1 user review

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Tristan Dubos's avatar image Tristan Dubos's country flag

Tristan Dubos

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If you are looking for CNV in panel and got more than 50 samples it work great and fast !