Exonerate specifications

Information


Unique identifier OMICS_11232
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C
License GNU General Public License version 3.0
Computer skills Advanced
Version 2.2
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Guy St C Slater <>

Exonerate article

Exonerate citation

2016
PMCID: 5148604

[…] genome, if available) of each species to identify the reciprocal best hits (tatusov et al., 1997). the sequences were trimmed down to open reading frame (i.e. flanked by start and stop codons) using exonerate (slater and birney, 2005). within each ortholog sets, multiple sequence alignment was performed using muscle (rrid:scr_011812) (edgar, 2004) and the percentage of sequence identity […]

Exonerate institution(s)
The Ensembl Group, EMBL – European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK

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