ExpEdit specifications

Unique identifier:
OMICS_05861
Restrictions to use:
None
Output data:
Results are shown as dynamic tables containing University of California, Santa Cruz (UCSC) links for a quick examination of the genomic context.
Computer skills:
Basic
Maintained:
Yes
Interface:
Web user interface
Input data:
Mapping data (in SAM/BAM format) or directly sequence reads [in FASTQ/short read archive (SRA) format] can be provided as input to carry out a comparative analysis against a large collection of known editing sites collected in DARNED database as well as other user-provided potentially edited positions.
Programming languages:
PHP, Python

ExpEdit support

Maintainer

This tool is not available anymore.

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Publications

Institution(s)

Dipartimento di Biochimica e Biologia Molecolare ‘E Quagliariello’, Università di Bari, Bari, Italy

Funding source(s)

Ministero dell'Istruzione, Università e Ricerca (MIUR, Italy); ‘Laboratorio di Bioinformatica per la Biodiversità Molecolare' (Progetto FAR, DM19410)’ Progetto Strategico Regione Puglia PS_012; AriSLA - Fondazione Italiana di Ricerca per la SLA

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