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Experimental design software tools | 16S ribosomal RNA sequencing data analysis

Metagenomic studies have dramatically expanded our knowledge of the microbial world. Furthermore, the amount of sample for sequencing has significantly increased with the development of high-throughput sequencing technologies. However, fully…
G T A T C G C T A
GPMicrobiome
Desktop

GPMicrobiome

Models bacterial compositions derived from 16S rRNA sequencing. GPMicrobiome is…

Models bacterial compositions derived from 16S rRNA sequencing. GPMicrobiome is a Stan implementation of the Temporal Gaussian Process Model for Compositional Data Analysis (TGP-CODA). The model…

G T A T C G C T A
micropower
Desktop

micropower

A framework for PERMANOVA power estimation tailored to marker-gene microbiome…

A framework for PERMANOVA power estimation tailored to marker-gene microbiome studies that will be analyzed by pairwise distances, which includes: (i) a method for distance matrix simulation that…

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