Uses probalistic methods for the filtration of liquid chromatography–mass spectrometry or gas chromatography-mass spectrometry. EMP evaluates the given instrument, detects compounds and calculates the probability of individual peaks. It can be useful for multiple purposes: for expert data assessment, automated generation of compound databases, performance analysis of the instrument or for validity assessment of biological models.

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EMP classification

EMP specifications

Software type:
Package
Restrictions to use:
None
Programming languages:
MATLAB
Computer skills:
Medium
Stability:
Stable
Source code URL:
https://sourceforge.net/p/expertomica-eda/code/HEAD/tree/
Interface:
Graphical user interface
Operating system:
Windows
License:
Academic Free License version 3.0
Version:
1.0

Publications

  • (Urban et al., 2009) Expertomica metabolite profiling: getting more information from LC-MS using the stochastic systems approach. Bioinformatics.
    PMID: 19602528

Credits

Institution(s)

Institute of Physical Biology, University of South Bohemia, Academic and University Center, Nové Hrady, Czech Republic

Funding source(s)

Ministry of Education, Youth and Sports of the Czech Republic under the grant MSM 6007665808 and grant HCTFOOD A/CZ0046/1/0008 of EEA funds.

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