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EXPLoRA-web specifications

Information


Unique identifier OMICS_13931
Name EXPLoRA-web
Interface Application programming interface
Restrictions to use None
Programming languages Java
Computer skills Advanced
Maintained Yes

Maintainer


  • person_outline Kathleen Marchal

Publication for EXPLoRA-web

EXPLoRA-web citation

library_books

Indel‐seq: a fast‐forward genetics approach for identification of trait‐associated putative candidate genomic regions and its application in pigeonpea (Cajanus cajan)

2017
Plant Biotechnol J
PMCID: 5466435
PMID: 28027425
DOI: 10.1111/pbi.12685

[…] To check the efficiency of Indel‐seq in identifying possible candidates (markers/genes) for the target traits, we have also used identified Indels (Table ) in a recently proposed method known as EXPLoRA‐web BSA (Duitama et al., ). We have significant results from each of the models proposed in EXPLoRA‐web BSA (Tables ). As expected, the lowest number of QTLs was reported in the high sensitive […]


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EXPLoRA-web institution(s)
Department of Information Technology, iGent Toren, Gent, Belgium; Department of Plant Biotechnology and Bioinformatics, UGent, Gent, Belgium; Bioinformatics Institute Ghent, Gent, Belgium; Department of Microbial and Molecular Systems, KU Leuven, Leuven, Belgium; Agrobiodiversity Research Area, International Center for Tropical Agriculture, Cali, Colombia; Department of Genetics, University of Pretoria, Hatfield Campus, Pretoria, South Africa
EXPLoRA-web funding source(s)
This work was supported by the Ghent University Multidisciplinary Research Partnership ‘Bioinformatics: from nucleotides to networks’, the Fonds Wetenschappelijk Onderzoek-Vlaanderen (grants n°G.0329.09, 3G042813, G.0A53.15N), the Agentschap voor Innovatie door Wetenschap en Technologie (NEMOA), the Katholieke Universiteit Leuven (PF/10/010) and the International Center for Tropical Agriculture.

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