EASE specifications

Information


Unique identifier OMICS_17728
Name EASE
Alternative name Expression Analysis Systematic Explorer
Software type Application/Script
Interface Command line interface
Operating system Windows
Computer skills Advanced
Version 1.21
Stability Stable
Maintained Yes

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EASE article

EASE citations

 (4)
2017
PMCID: 5482204

[…] with the delta threshold value of 7.48., in order to further investigate the biological functions of degs, reactome pathway enrichment analysis was conducted through david (27) by means of the expression analysis systematic explorer (ease) test (28). the ease score was applied to identify the significant categories. in the present study, the pathways with p<0.05 were considered […]

2016
PMCID: 4940109

[…] database for annotation, visualization and integrated discovery (david; david.abcc.ncifcrf.gov) (13,14) were used to screen the pathways enriched for in the degs from the cancer samples using the expression analysis systematic explorer score (a modified fisher's exact t-test) with bh multiple testing correction (12). a kegg pathway with a bh-corrected p<0.05 was considered […]

2012
PMCID: 3427046

[…] expressed genes; go, gene ontology; gsea, gene set enrichment analysis; pc, principal component; jnk, c-jun-n-terminal kinase; rma, robust multi-array average; fdr, false discovery rate; ease, expression analysis systematic explorer., the authors declare that they have no competing interests., ad analyzed the results, carried out bioinformatic analyses and wrote the paper; mjj carried […]

2008
PMCID: 2585085

[…] entrez gene queries [25,26]. statistical data, fold change quantities, and go annotations were managed within an excel spreadsheet (microsoft, redmond, wa). expression patterns were analyzed using expression analysis systematic explorer (ease) standalone software [27]. microarray data were submitted to ncbi gene expression omnibus as the data series gse10303 for platform gpl6423 with sample […]

EASE institution(s)
Laboratory of Immunopathogenesis and Bioinformatics, Frederick, MD, USA; Clinical and Molecular Retrovirology Section, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD USA

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