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expressionplot | A web-based framework for analysis of RNA-Seq and microarray gene expression data

A software package consisting of a default back end, which prepares raw sequencing or Affymetrix microarray data, and a web-based front end, which offers a biologically centered interface to browse, visualize, and compare different data sets. ExpressionPlot offers the gene expression community an easy-to-use tool for automated analysis of gene expression and RNA processing data. The back end offers a solution to the problem of detecting significant changes in gene expression and RNA processing, while the web-based interface offers data analysis, visualization and browsing tools that realize the biological potential of this new technology.

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expressionplot specifications

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expressionplot support


  • Brad A. Friedman <>


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Department of Molecular and Cell Biology, Harvard University, Cambridge, MA, USA; The Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA, USA; Department of Bioinformatics and Computational Biology, Genentech, Inc., South San Francisco, CA, USA; Department of Biochemistry and Molecular Biophysics, Columbia University College of Physicians and Surgeons, New York, NY, USA

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