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expressionplot | A web-based framework for analysis of RNA-Seq and microarray gene expression data

A software package consisting of a default back end, which prepares raw sequencing or Affymetrix microarray data, and a web-based front end, which offers a biologically centered interface to browse, visualize, and compare different data sets. ExpressionPlot offers the gene expression community an easy-to-use tool for automated analysis of gene expression and RNA processing data. The back end offers a solution to the problem of detecting significant changes in gene expression and RNA processing, while the web-based interface offers data analysis, visualization and browsing tools that realize the biological potential of this new technology.

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expressionplot forum

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expressionplot classification

expressionplot specifications

Unique identifier:
OMICS_01939
Interface:
Web user interface
Computer skills:
Basic
Maintained:
Yes
Software type:
Application/Script
Restrictions to use:
None
Stability:
Stable

expressionplot support

Maintainer

  • Brad A. Friedman <>

Credits

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Publications

Institution(s)

Department of Molecular and Cell Biology, Harvard University, Cambridge, MA, USA; The Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA, USA; Department of Bioinformatics and Computational Biology, Genentech, Inc., South San Francisco, CA, USA; Department of Biochemistry and Molecular Biophysics, Columbia University College of Physicians and Surgeons, New York, NY, USA

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