- Unique identifier:
- Restrictions to use:
- Web user interface
- Computer skills:
- Gregor Rot <>
- Jernej Ule <>
Just a quick update: expressRNA is undergoing a major update which should be done in steps by end of 2017, meanwhile you can download and setup the software via the GitHub repositories (all code is free for non-commercial use and online, look for repositories links at the expressRNA.org page).
The update (v2) will include several features, like FASTQ file upload and automatic processing of your data to infer alternative polyadenylation and motif analysis.
Stay tuned and write us with collab questions / suggestions at [email protected]
All the best,
(Rot et al., 2017)
High-Resolution RNA Maps Suggest Common Principles of Splicing and Polyadenylation Regulation by TDP-43.
PMID: 28467899 DOI: 10.1016/j.celrep.2017.04.028
Institute of Molecular Life Sciences and Swiss Institute of Bioinformatics, Zurich, Switzerland; MRC Laboratory of Molecular Biology, Cambridge, UK; Institut de Biologie de l’ENS (IBENS), Paris, France; UCL Institute of Neurology, Queen Square, London, UK; The Francis Crick Institute, London, UK; European Molecular Biology Laboratory, Heidelberg, Germany; Institute of Stem Cell Research, Helmholtz Center Munich, Neuherberg, Germany; Institute of Molecular Biology, Mainz, Germany; Faculty of Computer and Information Science, University of Ljubljana, Ljubljana, Slovenia
Supported by the European Research Council (206726-CLIP and 617837-Translate) and the Slovenian Research Agency (J7-5460); and by the Swiss National Science Foundation (grant 31003A_160095).
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