EXTREME specifications

Unique identifier:
OMICS_03428
Interface:
Command line interface
Operating system:
Unix/Linux
Computer skills:
Advanced
Maintained:
Yes
Software type:
Package/Module
Restrictions to use:
None
Programming languages:
Java, Perl, Python
Stability:
Stable

versioning

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No versioning.

EXTREME support

Documentation

forum

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No open topic.

Credits

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Publications

Institution(s)

Department of Computer Science, University of California, Irvine, CA, USA; Center for Complex Biological Systems, University of California, Irvine, CA, USA

User review

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1 user review

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1 user review

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Ka-Chun Wong's avatar image

Ka-Chun Wong

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The software is designed to be fast for motif discovery on large sequence datasets. The methodology is ingenious and well-justified from computational complexity view. I highly recommend people to try the software, although its software usability still needs improvement. Knowledge in command-line and installation is required.