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chevron_left Differential expression detection Bioinformatics workflows Quality control chevron_right
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Protocols

EzArray specifications

Information


Unique identifier OMICS_14933
Name EzArray
Interface Web user interface
Restrictions to use None
Biological technology Affymetrix
Programming languages PHP, R
Database management system MySQL
License GNU General Public License version 3.0
Computer skills Basic
Stability Stable
Maintained No

Maintainer


This tool is not maintained anymore.

Information


Unique identifier OMICS_14933
Name EzArray
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Biological technology Affymetrix
Operating system Unix/Linux
Programming languages PHP, R
Database management system MySQL
License GNU General Public License version 3.0
Computer skills Medium
Stability Stable
Requirements
Bioconductor
Maintained No

Versioning


No version available

Maintainer


This tool is not maintained anymore.

Publication for EzArray

EzArray citations

 (2)
library_books

A reproducible approach to high throughput biological data acquisition and integration

2015
PeerJ
PMCID: 4493686
PMID: 26157642
DOI: 10.7717/peerj.791

[…] includes no facilities for normalization, integration, or meta-analysis of the resulting independent query responses. finally, curated alternative data management and analysis platforms, such as ezarray (), bxarrays™, and oncomine (), provide web interfaces in which a user may perform only pre-selected analyses of the provided gene expression datasets. another open data management and access […]

library_books

Managing and querying gene expression data using Curray

2011
BMC Proc
PMCID: 3090758
PMID: 21554758
DOI: 10.1186/1753-6561-5-S2-S10

[…] have viewed such analysis as distinct applications as opposed to data manipulation within the gene expression “database” in its traditional sense., lims systems such as base [], mimas [], ezarray [], and arraytrack [] process raw expression data to bring it to the level where differential expression analysis can be performed. this step is usually called the pre-expression analysis. […]


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EzArray institution(s)
Research and Development, BioInfoRx, Inc, Middleton, WI, USA; Department of Oncology, Georgetown University, Washington DC, USA; Department of Oncology, University of Wisconsin-Madison, Madison, WI, USA
EzArray funding source(s)
This work was supported in part by Susan Komen Breast Cancer Foundation grant number BCTR95306.

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