Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 4
Release date: Oct 20 2010
Last update date: Oct 29 2018
Access: Public
Diseases: Erythema Infectiosum
Chemicals: Propidium
Genes: ANXA5
Dataset link Effects of shikonin on the gene expression of human lymphoma U937 cells

Experimental Protocol


U937 cells, a human lymphoma cell line, were treated with 100 nM shikonin and followed by incubation for 3h at 37°C. The cells treated with dimethyl sulfoxide were served as control. Total RNA samples were prepared from the cells. Gene expression was analyzed by an Affymetrix GeneChip® system with a Human Genome U133-plus 2.0 array for analysis of over 47,000 transcripts. Sample preparation for array hybridization was carried out as described in the manufacturer’s instructions.

Repositories


GEO

GSE24743

ArrayExpress

E-GEOD-24743

BioProject

PRJNA132137

Download


Contact


Yoshiaki Tabuchi