Dataset features

Specifications


Application: Gene expression microarray analysis, miRNA array analysis
Number of samples: 339
Release date: Jul 19 2010
Last update date: Oct 29 2018
Access: Public
Diseases: Ependymoma, Neoplasms, Radial Neuropathy
Dataset link Comparative genomics matches mutations and cells to generate faithful ependymoma models

Experimental Protocol


[human mRNA] samples: 83 human ependynoma primary tumors were collected and clustered into distinct classes by unsupervised methods and then compared to mouse model data. [mouse mRNA] samples: 192 mouse tumors and cell lines were collected and clustered into distinct classes by unsupervised methods and then compared to human tumors. [human miRNA] samples: 64 human ependynoma primary tumors were collected and miRNA expression was assesed and compared to genomic expression

Repositories


GEO

GSE21687

ArrayExpress

E-GEOD-21687

BioProject

PRJNA125851

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Contact


Richard Gilbertson
Richard James Gilbertson

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