Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 36
Release date: Feb 20 2018
Last update date: Nov 29 2018
Access: Public
Diseases: Bronchial Diseases, Pulmonary Disease, Chronic Obstructive
Computational protocol: bcbio-nextgen, HISAT2, Subread, Array Suite, DESeq2, IPA
Dataset link RNA sequencing of human bronchial epithelial cell transcriptomes after repopulation and differentiation on bronchial scaffolds from COPD patients and healthy donors

Experimental Protocol


Normal bronchial epithelial (NHBE) cells were seeded on decellularized bronchial scaffolds from 3 COPD patients and 3 healthy donors. Differentiation was induced 4 days later and repopulated scaffolds were collected after 0, 7, 14, 21, 28 and 35 days of differentiation.

Repositories


GEO

GSE107971

ENA

SRP126553

BioProject

PRJNA422059

Download


Dataset Statistics

info

Citations per year

Dataset publication