Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 4
Release date: Dec 13 2012
Last update date: Mar 31 2016
Access: Public
Dataset link SKIP Is a Component of the Spliceosome Linking Alternative Splicing and the Circadian Clock in Arabidopsis

Experimental Protocol


Our findings revealed that AtSKIP is a splicing factor and a component of spliceosome. To further investigate effects of mutation in SKIP on the genome-wide changes of alternative splicing, we performed ultra-highthroughput RNA sequencing, using 10-day old seedlings. Two biological replicates for both wild type (Col-0) and skip-2 were designed.

Repositories


GEO

GSE32216

ArrayExpress

E-GEOD-32216

ENA

SRP008262

BioProject

PRJNA147225

Download


Contact


Xiaoxue Wang