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Protocol publication
[…] Predicted protein sequences were analyzed and theoretical isoelectric points (pIs) and mass values of mature peptides were calculated using the PeptideMass program (http://us.expasy.org/tools/peptidemass.html). Amino acid sequence alignment was performed using DNAMAN software. A phylogenetic tree of Ran proteins was constructed using MEGA5 software. […]
Pipeline specifications
Software tools | PeptideMass, DNAMAN |
---|---|
Databases | ExPASy |
Applications | Phylogenetics, Protein sequence analysis |
Organisms | Arabidopsis thaliana |
Chemicals | 2,4-Dichlorophenoxyacetic Acid |