Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 16
Release date: Dec 23 2013
Last update date: Dec 26 2013
Access: Public
Diseases: Choroiditis, Eye Diseases, Macular Degeneration
Dataset link Expression data for human retinal pigment epithelium (RPE)/choroid - early age-related macular degeneration (AMD) and control samples

Experimental Protocol


Using AltAnalyze (ver. 2.0.7 beta), we analyzed nine early AMD and nine control eyes using Affymetrix Human Exon ST 1.0 arrays. Following initial processing in AltAnalyze, two control arrays were identified as potential outliers by tests implement in arrayQualityMetrics, a package for R.

Repositories


GEO

GSE50195

ArrayExpress

E-GEOD-50195

BioProject

PRJNA217084

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