Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 308
Release date: May 24 2012
Last update date: Aug 16 2018
Access: Public
Diseases: Carcinoma, Neoplasms, Neoplasms, Basal Cell
Chemicals: Tyrosine
Dataset link A Molecular Taxonomy of Urothelial Carcinoma

Experimental Protocol


Total RNA from fresh-frozen resection samples of 308 urothelial carcinomas was hybridized to the Illumina HumanHT-12 V3.0 expression beadchip arrays (Illumina Inc) at the SCIBLU Genomics Centre at Lund University Sweden (http://www.lth.se/sciblu). Supplementary files: GSE32894_non-normalized_308UCsamples.txt file = Raw intensity values for 308 UC (urothelial tumor) samples subjected only to background correction. GSE32894_reps_normals_preprocess*.txt files = Descriptive details and non-normalized data for technical replicates and normal samples that were used only in the preprocessing of the data. This dataset partly overlaps with Series GSE32549. Names of the overlapping sample names are the same, but the title of each sample is unique to the hybridization.

Repositories


GEO

GSE32894

ArrayExpress

E-GEOD-32894

BioProject

PRJNA146635

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Contact


Gottfrid Sjodahl