Dataset features

Specifications


Application: SNP array data analysis, aCGH data analysis
Number of samples: 21
Release date: Sep 7 2012
Last update date: Sep 7 2012
Access: Public
Taxon: Lactococcus lactis subsp. lactis
Dataset link Comparative genome hybridization profiles of six strains of Lactococcus lactis

Experimental Protocol


Strains were cultured on M17. At least three independent cultures of the six strains were performed. Genomic DNA was extracted from cells grown overnight on M17 and radiolabelled cDNA were prepared and hybridized on nylon arrays. 1948 amplicons specific of Lactococcus lactis IL1403 genes were spotted twice on the array. 3 independent repetitions were performed.

Repositories


GEO

GSE23990

ArrayExpress

E-GEOD-23990

BioProject

PRJNA133195

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Contact


Muriel Cocaign-Bousquet