Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 30
Release date: Mar 25 2010
Last update date: Mar 22 2012
Access: Public
Diseases: Metabolic Diseases
Dataset link Development and heat stress-induced transcriptomic changes during embryogenesis of the coral Acropora palmata

Experimental Protocol


Our experimental setup followed a reference design where all samples were hybridized against the same pool made up of equal amounts of RNA from all samples in the experiment. Biological duplicate samples were used for each temperature at each developmental time period. Common reference samples were labeled with Cy3 dye, while temperature samples were labeled with Cy5 dye. Microarrays for A. palmata contained 2,051 coding sequences, of which 54.3% had functional annotations as determined by homology to known genes.

Repositories


GEO

GSE21038

ArrayExpress

E-GEOD-21038

BioProject

PRJNA126461

Download


Contact


Kevin Portune