Dataset features

Specifications


Dataset type: Expression profiling by high throughput sequencing, RNA-seq of coding RNA, Transcriptome or Gene expression
Number of samples: 25
Release date: May 6 2013
Last update date: Oct 18 2018
Access: Public
Computational protocol: BCL2FASTQ Conversion Software, FastQC, TopHat, Cufflinks
Dataset link Identification of differentially expressed transcripts and pathways one week and six months following implant of left ventricular devices

Experimental Protocol


Examination of the effect of LVAD implant on peripheral blood transcriptome. Blood was drawn before LVAD placement, 7 days post implant, and 180 days post implant. RNA sequencing was performaed on all samples.

Repositories


GEO

GSE46665

ArrayExpress

E-GEOD-46665

ENA

SRP022133

BioProject

PRJNA201433

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Contact


Rod Staggs
Rod A. Staggs

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