Dataset features

Specifications


Application: sRNA-seq analysis
Number of samples: 36
Release date: Oct 31 2016
Last update date: Oct 26 2018
Access: Public
Diseases: Carcinoma, Renal Cell
Computational protocol: Bowtie, edgeR, qbase+, SPSS, UCSC Genome Browser, miRBase, GtRNAdb
Dataset link Next Generation Sequencing of small non-coding RNAs in the tissue of patients with renal cell carcinoma

Experimental Protocol


small RNA expression profiling in clear cell renal cell carcinoma and corresponding normal renal tissues samples Please note that each 'ccRCC' sample is followed by the corresponding normal renal tissue sample. For example, the '2014_001_002' is the corresponding normal tissue for '2014_001_001' ccRCC sample, except the last two samples 2014_001_028 and 2014_001_029 are listed in an inverse order.

Repositories


GEO

GSE73342

ENA

SRP064011

BioProject

PRJNA296713

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Contact


Jörg Ellinger

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