FAASG statistics

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Citations per year

Number of citations per year for the bioinformatics software tool FAASG
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Tool usage distribution map

This map represents all the scientific publications referring to FAASG per scientific context
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Associated diseases

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FAASG specifications

Information


Unique identifier OMICS_19317
Name FAASG
Alternative name Functional Annotation of All Salmonid Genomes
Software type Framework/Library
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Registration required Yes
Maintained Yes

Maintainers


  • person_outline Daniel Macqueen
  • person_outline Craig Primmer
  • person_outline Ross Houston
  • person_outline Barbara Nowak

Publication for Functional Annotation of All Salmonid Genomes

FAASG citations

 (2)
library_books

De novo transcriptome assembly, annotation and comparison of four ecological and evolutionary model salmonid fish species

2018
BMC Genomics
PMCID: 5759245
PMID: 29310597
DOI: 10.1186/s12864-017-4379-x

[…] gical, evolutionary and fisheries research. In addition, they provide a solid platform for generating genomic resources for other salmonid species. The latter point forms the primary objective of the FAASG (Functional Annotation of All Salmonid Genomes), a recent initiative developed by the ICSASG, which aims to generate functionally annotated resources for nine species of salmonids and integrate […]

library_books

Genotype Imputation To Improve the Cost Efficiency of Genomic Selection in Farmed Atlantic Salmon

2017
PMCID: 5386885
PMID: 28250015
DOI: 10.1534/g3.117.040717

[…] sity (potentially using low-cost sequencing methods), and/or prioritization of putative functional variants in the SNP panel used for prediction. The latter may be enhanced by initiatives such as the Functional Annotation of All Salmonid Genomes (FAASG; ). […]


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FAASG institution(s)
Institute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen, UK; Department of Biology, University of Turku, Turku, Finland; [etc.]
FAASG funding source(s)
Supported by the Biotechnology and Biological Sciences Research Council (UK) (ref: BB/P02582X/1); by the ICSASG and the U.S. Department of Agriculture (USDA), through NIFA National Research Support Project 8.

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