FAASG statistics

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Citations per year

Number of citations per year for the bioinformatics software tool FAASG

Tool usage distribution map

This map represents all the scientific publications referring to FAASG per scientific context
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FAASG specifications


Unique identifier OMICS_19317
Alternative name Functional Annotation of All Salmonid Genomes
Software type Framework/Library
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Registration required Yes
Maintained Yes


  • person_outline Daniel Macqueen
  • person_outline Craig Primmer
  • person_outline Ross Houston
  • person_outline Barbara Nowak

Publication for Functional Annotation of All Salmonid Genomes

FAASG citations


De novo transcriptome assembly, annotation and comparison of four ecological and evolutionary model salmonid fish species

BMC Genomics
PMCID: 5759245
PMID: 29310597
DOI: 10.1186/s12864-017-4379-x

[…] gical, evolutionary and fisheries research. In addition, they provide a solid platform for generating genomic resources for other salmonid species. The latter point forms the primary objective of the FAASG (Functional Annotation of All Salmonid Genomes), a recent initiative developed by the ICSASG, which aims to generate functionally annotated resources for nine species of salmonids and integrate […]


Genotype Imputation To Improve the Cost Efficiency of Genomic Selection in Farmed Atlantic Salmon

PMCID: 5386885
PMID: 28250015
DOI: 10.1534/g3.117.040717

[…] sity (potentially using low-cost sequencing methods), and/or prioritization of putative functional variants in the SNP panel used for prediction. The latter may be enhanced by initiatives such as the Functional Annotation of All Salmonid Genomes (FAASG; ). […]

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FAASG institution(s)
Institute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen, UK; Department of Biology, University of Turku, Turku, Finland; [etc.]
FAASG funding source(s)
Supported by the Biotechnology and Biological Sciences Research Council (UK) (ref: BB/P02582X/1); by the ICSASG and the U.S. Department of Agriculture (USDA), through NIFA National Research Support Project 8.

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