Dataset features

Specifications


Application: Gene expression microarray analysis, miRNA array analysis
Number of samples: 51
Release date: May 27 2010
Last update date: Sep 20 2012
Access: Public
Chemicals: Tretinoin
Dataset link Large-Scale Expression Analysis Reveals Distinct microRNA Profiles at Different Stages of Human Neurodevelopment

Experimental Protocol


The experiment consists of a total of 51 arrays: 29 retinoic acid time series arrays (0,2,4,6,8,12,14,21 and 28 days), 2 each of NT2-derived neurons and astrocytes, 12 primary human fetal astrocytes, 3 primary human embryonic astrocytes and 3 primary human neurons. Each condition has a minimum of 2 biological replicates. The samples were compared as single channel experiments. NOTE: The raw data files were submitted as generated in Quantarray with 2 channels, but due to issues with the control sample dye (Cy5 on Channel 1), only the Channel 2 (Cy3) data was analysed.

Repositories


GEO

GSE15888

ArrayExpress

E-GEOD-15888

BioProject

PRJNA117053

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Contact


Brandon Smith

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