FAME specifications

Information


Unique identifier OMICS_15748
Name FAME
Alternative names FAst Metabolizer, FAME 2
Software type Package/Module
Interface Graphical user interface
Restrictions to use License purchase required
Output data A page which displays the structure of the compound with the predicted SoMs highlighted with yellow circles, the probabilities generated by the extra trees model (the percentage of trees that predicted a given atom as a SoM), the atoms that scored above the decision threshold of the current model, some metadata and helpful information as well as the model used for the predictions.
Output format HTML
Operating system Unix/Linux, Mac OS, Windows
Computer skills Medium
Stability Stable
Requirements Java
Maintained Yes

Versioning


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Maintainers


  • person_outline Robert Glen <>
  • person_outline Johannes Kirchmair <>

Publications for FAst Metabolizer

FAME institution(s)
Faculty of Mathematics, Informatics and Natural Sciences, Department of Computer Science, Center for Bioinformatics, Universitat Hamburg, Hamburg, Germany; CZ-OPENSCREEN: National Infrastructure for Chemical Biology, Laboratory of Informatics and Chemistry, Faculty of Chemical Technology, University of Chemistry and Technology Prague, Prague, Czech Republic
FAME funding source(s)
Supported by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) project number KI 2085/1-1 and by the Ministry of Education of the Czech Republic project numbers MSMT No 20-SVV/2017, NPU ILO1220, and LM2015063 and the Erasmus+ Programme of the European Commission.

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