FancyGene specifications

Unique identifier:
OMICS_04278
Restrictions to use:
None
Stability:
Stable
Interface:
Web user interface
Computer skills:
Basic
Maintained:
Yes

FancyGene support

Maintainer

This tool is not available anymore.

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Publications

Institution(s)

Department of Experimental Oncology, European Institute of Oncology, IFOM-IEO Campus, Milan, Italy

User review

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1 user review

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1 user review

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ken w.'s avatar image

ken w.

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This software only displays one gene at a time.

It does not read GFF file format properly. I had to manually alter the features of the GFF file to make it work. Ex. I had to change "five_prime_UTR" to "utr", "CDS" to "exon", "three_prime_UTR" to "utr".

You cannot use any genomic positions greater than 5,000,000 or you get an error
Error: Can't use string ("5000000") as an ARRAY ref while "strict refs" in use at FancyGene/Errors.pm line 218, <fh00001Os_WRKY_genes2.gff3.txt> line 38.

Bug reporting does not work. I tried reporting the bug and I got the following error:
Not Found
The requested URL /~drambald/cgi-bin/fancygene/bugreport.pl was not found on this server.
Apache/2.2.22 (FreeBSD) PHP/5.4.3 proxy_html/3.1.2 mod_ssl/2.2.22 OpenSSL/0.9.8q DAV/2 Server at bio.ieo.eu Port 80

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