FISH specifications

Unique identifier:
OMICS_11724
Software type:
Package/Module
Restrictions to use:
None
Operating system:
Unix/Linux, Mac OS, Windows
Computer skills:
Advanced
Stability:
Stable
Name:
Fast Identification of Segmental Homology
Interface:
Command line interface
Input data:
FISH requires as input a list of the linear order and orientation of features on each contig and a list of the pairwise homologies between features.
Programming languages:
C++
Version:
1.0
Maintained:
Yes

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FISH support

Maintainer

  • Todd J. Vision <>

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Publications

Institution(s)

Department of Mathematics, University of Southern California, Los Angeles, CA, USA; Department of Operations Research, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA; Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA

Funding source(s)

This work was supported by NSF DMS-0102008 and NSF DBI-40734.

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