FaST-LMM-EWASher specifications

Information


Unique identifier OMICS_07514
Name FaST-LMM-EWASher
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python, R
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


No version available

Publication for FaST-LMM-EWASher

FaST-LMM-EWASher citation

library_books

Comparison of different cell type correction methods for genome scale epigenetics studies

2017
BMC Bioinformatics
PMCID: 5391562
PMID: 28410574
DOI: 10.1186/s12859-017-1611-2

[…] urinary arsenic exposure after adjusting for multiple testing by controlling false discovery rate (FDR) at 0.05. ReFACTor identified the largest number of CpGs (~60,000) and no CpGs were detected by FaST-LMM-EWASher (Table ). RefFreeCellMix also identified a large number of CpGs (~3000). SVA and RefFreeEWAS detected more CpGs compared to the remaining methods. (Table ). Next, we assessed the numb […]

FaST-LMM-EWASher institution(s)
eScience Research Group, Microsoft Research, Los Angeles, CA, USA; The Broad Institute of MIT and Harvard, Cambridge, MA, USA; School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA; Harvard Medical School, Boston, MA, USA; Massachusetts General Hospital, Boston, MA, USA

FaST-LMM-EWASher reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review FaST-LMM-EWASher