Fastahack statistics

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Citations per year

Number of citations per year for the bioinformatics software tool Fastahack

Tool usage distribution map

This map represents all the scientific publications referring to Fastahack per scientific context
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Fastahack specifications


Unique identifier OMICS_20516
Name Fastahack
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input format FASTA, FA
Output data Some sequences and subsequences.
Output format FAI
Operating system Unix/Linux
Programming languages C, C++
License MIT License
Computer skills Advanced
Stability Stable
Maintained Yes




No version available


  • person_outline Erik Garrison

Fastahack citation


High resolution mapping reveals hundreds of genetic incompatibilities in hybridizing fish species

PMCID: 4080447
PMID: 24898754
DOI: 10.7554/eLife.02535.024

[…] data sets of the same size generated by randomly sampling regions throughout the genome that were not in significant LD (p>0.013 with all unlinked regions) using a custom perl script and the program fastahack ( For LD regions that included only 1 marker (n = 60), we included the flanking region defined by the closest 5′ and 3′ marker. To analyze coding regions, w […]

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Fastahack institution(s)
Marth Lab, Boston College, Chestnut Hill, MA, USA

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