FastaValidator statistics

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Citations per year

Number of citations per year for the bioinformatics software tool FastaValidator

Tool usage distribution map

This map represents all the scientific publications referring to FastaValidator per scientific context
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FastaValidator specifications


Unique identifier OMICS_04847
Name FastaValidator
Software type Framework/Library
Interface Command line interface
Restrictions to use None
Input format FASTA
Operating system Unix/Linux
Programming languages Java
License GNU Lesser General Public License version 3.0
Computer skills Advanced
Version 1.0.1
Stability Stable
JFlex, Ant
Maintained Yes




No version available


  • person_outline FastaValidator Team

Additional information

Publication for FastaValidator

FastaValidator citation


CDinFusion – Submission Ready, On Line Integration of Sequence and Contextual Data

PLoS One
PMCID: 3172294
PMID: 21935468
DOI: 10.1371/journal.pone.0024797
call_split See protocol

[…] y). show the implementation details of the software's workflow. FASTA files are parsed and validated, when uploaded by the FastaReader class. It implements the FastaValidatorCallback interface of the FastaValidator package (, which has been developed within the frame of this project. This event-driven parser is designed to quickly parse and validate arbitrarily l […]

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FastaValidator institution(s)
Microbial Genomics and Bioinformatics Research Group, Max Planck Institute for Marine Microbiology, Bremen, Germany; Jacobs University Bremen gGmbH, Bremen, Germany; Mediomix GmbH, Köln, Germany
FastaValidator funding source(s)
Supported by the Max Planck Society.

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