FastDMA statistics

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FastDMA specifications

Information


Unique identifier OMICS_00794
Name FastDMA
Software type Package/Module
Interface Command line interface
Restrictions to use None
Biological technology Illumina
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

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Publication for FastDMA

FastDMA in publication

PMCID: 4304832
PMID: 25233806
DOI: 10.1016/j.ymeth.2014.08.011

[…] is a bioconductor package that uses a kernel function to aggregate groups of significant probes where the distance to the next consecutive probe is less than the designated number of nucleotides., fastdma is a package written in c++/python that includes a function to preform basic quantile normalisation before analysing samples for dmps or dmrs. the dmp analysis uses ancova (a generalised […]


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FastDMA institution(s)
Bioinformatics Division/Center for Synthetic and Systems Biology, Tsinghua National Laboratory for Information Science and Technology (TNLIST), Department of Automation, Tsinghua University, Beijing, China

FastDMA review

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Anonymous user #253

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Desktop
A good package for analyzing large-scale 450k array data