FastHiC specifications

Unique identifier:
OMICS_11675
Interface:
Command line interface
Input data:
The input Hi-C data file is a text file, with 4 columns respectively as fragment 1 number, fragment 2 number, observed frequency and expected frequency.
Programming languages:
Java
Version:
1.0
Maintained:
Yes
Software type:
Package/Module
Restrictions to use:
None
Operating system:
Unix/Linux, Mac OS, Windows
Computer skills:
Advanced
Stability:
Beta

versioning

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FastHiC distribution

download

FastHiC support

Documentation

Maintainer

  • Ming Hu <>

forum

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Credits

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Publications

Institution(s)

Department of Biostatistics, University of North Carolina, Chapel Hill, NC, USA; Genetics, University of North Carolina, Chapel Hill, NC, USA; Computer Science, University of North Carolina, Chapel Hill, NC, USA; Curriculum in Bioinformatics and Computational Biology, University of North Carolina, Chapel Hill, NC, USA; College of Veterinary Medicine, Nanjing Agricultural University, Nanjing, Jiangsu, China; Division of Biostatistics, Department of Population Health, New York University School of Medicine, New York, NY, USA

Funding source(s)

This research was supported by the NIH grants R01-HG006292, R01-HG006703, and U54DK107977.

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