FastPCR pipeline

FastPCR specifications

Information


Unique identifier OMICS_02336
Name FastPCR
Software type Application/Script, Package/Module
Interface Command line interface
Restrictions to use License purchase required
Operating system Unix/Linux, Windows
Programming languages Java
Computer skills Medium
Version 6.6.02
Stability Stable
Free trial Yes
Maintained Yes
Wikipedia https://en.wikipedia.org/wiki/FastPCR

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Documentation


Maintainers


  • person_outline FastPCR Team <>
  • person_outline Ruslan Kalendar <>
  • person_outline Bekbolat Khassenov <>
  • person_outline Erlan Ramanculovb <>
  • person_outline Olga Samuilova <>
  • person_outline Konstantin Ivanov <>

Information


Unique identifier OMICS_02336
Name FastPCR
Software type Application/Script
Restrictions to use None
Programming languages Java
Computer skills Medium
Stability Stable
Maintained Yes
Wikipedia https://en.wikipedia.org/wiki/FastPCR

Documentation


Maintainers


  • person_outline FastPCR Team <>
  • person_outline Ruslan Kalendar <>
  • person_outline Bekbolat Khassenov <>
  • person_outline Erlan Ramanculovb <>
  • person_outline Olga Samuilova <>
  • person_outline Konstantin Ivanov <>

Publications for FastPCR

FastPCR IN pipelines

 (2)
2015
PMCID: 4524895
PMID: 26300899
DOI: 10.3389/fpls.2015.00602

[…] kit (clontech, laboratories, mountain view, ca), according to the manufacturer's instructions. the protein encoded by the open reading frame (orf) of the ah24 cdna was deduced with the aid of the fastpcr 6.0 program (http://en.bio-soft.net/pcr/fastpcr.html). bioinformatic analyses were performed to determine the possible biological function of the ah24 protein and to search for conserved […]

2012
PMCID: 3504151
PMID: 23185413
DOI: 10.1371/journal.pone.0049705

[…] may 2012) to assist in locating potential gene fusions. three spanning reads and two split reads were required to call sequence reads a gene fusion., primers used in pcr were designed with the fastpcr software [16]. the full list of applied primers is given in table 2. the primers used for detection of the hey1- ncoa2 fusion were identical to the primers used by wang et al [10]. cdna pcr […]

FastPCR institution(s)
PrimerDigital Ltd, Helsinki, Finland; RSE "National Center for Biotechnology" under the Science Committee, Ministry of Education and Science of the Republic of Kazakhstan, Astana, Kazakhstan; Department of Biochemistry, I.M. Sechenov First Moscow State Medical University, Moscow, Russia; Department of Biophysics, Faculty of Biology, M.V. Lomonosov Moscow State University, Moscow, Russia
FastPCR funding source(s)
Supported by Primer Digital Ltd. and by the Science Committee of the Ministry of Education and Science of the Republic of Kazakhstan (grant 5135/GF4).

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