FATCAT protocols

FATCAT specifications

Information


Unique identifier OMICS_03639
Name FATCAT
Alternative name Flexible structure AlignmenT by Chaining Aligned fragment pairs allowing Twists
Interface Web user interface
Restrictions to use None
Input data Protein primary and secondary structures
Input format PDB
Programming languages C++, Perl
Computer skills Basic
Stability Stable
Maintained Yes

Documentation


Publications for Flexible structure AlignmenT by Chaining Aligned fragment pairs allowing Twists

FATCAT IN pipeline

2016
PMCID: 4789359
PMID: 27034663
DOI: 10.1155/2016/3136024

[…] [39, 40]. additionally, pairwise structural alignment between the template and the modeled target protein was performed in order to predict structural similarity between the two, using the server fatcat (figures 4(a) and 4(b)) [33]., the structure of the protein was predicted by swiss modeling and visualized using pymol version 1.3 [41], followed by the validation of the 3-dimensional […]

FATCAT institution(s)
The Burnham Institute, La Jolla, CA, USA
FATCAT funding source(s)
This research was supported by NIH grant GM63208.

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