FATHMM-indel statistics

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Citations per year

Number of citations per year for the bioinformatics software tool FATHMM-indel

Tool usage distribution map

This map represents all the scientific publications referring to FATHMM-indel per scientific context
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FATHMM-indel specifications


Unique identifier OMICS_22270
Name FATHMM-indel
Alternative name Functional analysis through hidden Markov models indel
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes


  • person_outline Michael Ferlaino

Publication for Functional analysis through hidden Markov models indel

FATHMM-indel citation


An integrative approach to predicting the functional effects of small indels in non coding regions of the human genome

BMC Bioinformatics
PMCID: 5955213
PMID: 28985712
DOI: 10.1186/s12859-017-1862-y

[…] the functional impact of indels in non–coding regions of the human genome. Our method can be seen as a generalisation of FATHMM [] for prediction beyond point mutations. A web–based implementation of FATHMM–indel is available at indels.biocompute.org.uk. […]

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FATHMM-indel institution(s)
Big Data Institute, University of Oxford, Oxford, UK; Nuffield Department of Obstetrics and Gynaecology, University of Oxford, Oxford, UK
FATHMM-indel funding source(s)
Supported by MRC grant MR/M01326X/1; the EPSRC grant EP/K008250/1; the Qiagen Inc. through a licence agreement with Cardiff University and by the MRC IEU grant MC UU 12013/8.

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