FCM specifications

Information


Unique identifier OMICS_29808
Name FCM
Alternative names Flow Cytometry, py-fcm
Software type Framework/Library
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Python
License BSD 3-clause “New” or “Revised” License
Computer skills Advanced
Version 0.9.1
Stability Stable
Maintained Yes

Download


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Versioning


No version available

Documentation


Maintainer


  • person_outline Jacob Frelinger

Additional information


https://pythonhosted.org/fcm/

FCM citation

library_books

Hierarchical Modeling for Rare Event Detection and Cell Subset Alignment across Flow Cytometry Samples

2013
PLoS Comput Biol
PMCID: 3708855
PMID: 23874174
DOI: 10.1371/journal.pcbi.1003130

[…] near in the number of events and samples and quadratic in the number of markers. Open source code for fitting DPGMM and HDPGMM models to flow cytometry data is available from http://code.google.com/p/py-fcm/. The code is written in the Python programming language, and will run on regular CPUs, but is optimized for massively parallel computing using the CUDA interface (a suitable Nvidia GPU is requ […]

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