FCROS statistics

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Associated diseases

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FCROS specifications

Information


Unique identifier OMICS_02234
Name FCROS
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 2.0
Computer skills Advanced
Version 1.5.6
Stability Stable
Requirements
R(≥3.1.0)
Maintained Yes

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Documentation


Publication for FCROS

FCROS in publications

 (2)
PMCID: 5325209
PMID: 28234898
DOI: 10.1371/journal.pone.0170762

[…] namely the peak intensity-based significance b [], standard z-score and its robust version called m-score [, ]. in addition, we used two rank-based (non-parametric) methods implemented in the fcros (version 1.2) [] and rankprod (version 2.42.0) [, ] r packages as well as one linear modeling approach with empirical bayes estimation implemented in the limma r package (version 3.26.0) [, ]. […]

PMCID: 4059888
PMID: 24898753
DOI: 10.7554/eLife.02104.025

[…] 1.1 to calculate probe set signal intensities using robust multi-array average (rma) algorithms with default settings., to select the de genes, we used the fold change rank ordering statistics (fcros) method (). in the fcros method, k pairs of test/control samples are used to compute fold changes (fc). for each pair of test/control samples, obtained fcs for all genes are ranked […]


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FCROS institution(s)
Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), INSERM U964, CNRS UMR 7104, Université de Strasbourg, Illkirch, France

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