Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 132
Release date: Oct 5 2011
Last update date: Sep 1 2015
Access: Public
Diseases: Congenital, Hereditary, and Neonatal Diseases and Abnormalities, Lupus Vasculitis, Central Nervous System
Genes: CAPRIN1, CLEC4A, KRT23, MLC1, PLSCR1, PROK2, ZBTB16
Dataset link Major Depressive Disorder blood gene expression

Experimental Protocol


In total, 33 MDD patients and 34 healthy controls were analyzed using basal gene expression in whole blood, and gene expression from whole blood that was stimulated with LPS for 5-6 h, using microarrays. Patients were arbitrarily selected from all patients to serve as primary cohort (nMDD = 21 (MDD01-MDD21); nControls = 21 (Con01-Con21)), or replication cohort (nMDD = 12 (MDD22-MDD35); nControls = 13 (Con22-Con37)) using microarrays. This submission does not include Samples CON21_LPS or CON30_LPS.

Repositories


GEO

GSE19738

ArrayExpress

E-GEOD-19738

BioProject

PRJNA122201

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