Integrates any kind of genomic feature data represented by chromosome positional information with the known reference annotation based on the positional overlap. FEATnotator also reports overlap and proximity in genomic information from any user-defined datasets including those from next generation sequencing (NGS) applications. It allows to compare genomic datasets relative to one another, and to guide continuing research such as surveys of genomic selection and genetic marker development. For single nucleotide polymorphism (SNP) analyses, the software indicates details of protein translation consequence.
Center for Genomics and Bioinformatics, Indiana University, Bloomington, IN, USA; School of Informatics and Computing, Indiana University, Bloomington, IN, USA; Department of Biology, Indiana University, Bloomington, IN, USA
FEATnotator funding source(s)
This work was supported by USDA ARS Specific Cooperative Agreement 58-6631-0-101, the Cacao Genome Project of MARS, the METACyt Initiative of Indiana University, and the Lilly Endowment.