FeatureExtract protocols

FeatureExtract specifications

Information


Unique identifier OMICS_24770
Name FeatureExtract
Alternative name gb2tab
Interface Web user interface
Restrictions to use Academic or non-commercial use
Input format GenBank
Output data Two tables.
Output format TSV
Computer skills Basic
Version 1.2
Stability Stable
Maintained Yes

Maintainers


  • person_outline NetChop Team <>
  • person_outline Rasmus Wernersson <>

Information


Unique identifier OMICS_24770
Name FeatureExtract
Alternative name gb2tab
Interface Command line interface
Restrictions to use Academic or non-commercial use
Operating system Unix/Linux, Mac OS, Windows
Programming languages Python
Computer skills Advanced
Version 1.2.1
Stability Stable
Maintained Yes

Download


Versioning


Add your version

Maintainers


  • person_outline NetChop Team <>
  • person_outline Rasmus Wernersson <>

Publication for FeatureExtract

FeatureExtract IN pipelines

 (2)
2011
PMCID: 3265557
PMID: 22176950
DOI: 10.1186/1743-422X-8-547

[…] sequence was located by blast search against two reference strains dumas (nc_001348) and varilrix (dq008354). complementary determining sequences (cdss) of the reference strains were extracted using featureextract 1.2 server program http://www.cbs.dtu.dk/services/featureextract/ and used as query. the resulting data included the first and last nucleotide positions of the each orf in the strain […]

2011
PMCID: 3265557
PMID: 22176950
DOI: 10.1186/1743-422X-8-547

[…] dumas (nc_001348) and varilrix (dq008354). complementary determining sequences (cdss) of the reference strains were extracted using featureextract 1.2 server program http://www.cbs.dtu.dk/services/featureextract/ and used as query. the resulting data included the first and last nucleotide positions of the each orf in the strain suduvax genome and direction of the orfs. the orf information […]

FeatureExtract institution(s)
Center for Biological Sequence Analysis, BioCentrum-DTU, Technical University of Denmark, Lyngby, Denmark
FeatureExtract funding source(s)
Supported by a grant from the Danish Technical Research Council (STVF) for ‘Systemic Transcriptomics in Biotechnology’.

FeatureExtract reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review FeatureExtract