FELLA specifications

Information


Unique identifier OMICS_29000
Name FELLA
Software type Package/Module
Interface Command line interface
Restrictions to use Academic or non-commercial use
Input data A list of metabolites with KEGG identifiers.
Input format TXT
Output data Some tables and sub-networks in graph format.
Output format TXT,RData
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.1.5
Stability Beta
Requirements
AnnotationDbi, methods, stats, plyr, graphics, Matrix, utils, testthat, BiocStyle, biomaRt, rmarkdown, knitr, org.Hs.eg.db, org.Mm.eg.db, GOSemSim, igraph, shiny, magrittr, KEGGREST, R(>=3.5.0), DT, visNetwork
Maintained Yes

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Versioning


No version available

Maintainer


Additional information


https://bioconductor.org/packages/devel/bioc/vignettes/FELLA/inst/doc/quickstart.html https://github.com/b2slab/FELLA

Publications for FELLA

FELLA institution(s)
Departament d'Enginyeria de Sistemes, Automàtica i Informàtica Industrial, Universitat Politècnica de Catalunya, Barcelona, Spain; Networking Biomedical Research Centre in the subject area of Bioengineering, Biomaterials and Nanomedicine (CIBER-BBN), Madrid, Spain; Institut de Recerca Pediàtrica Hospital Sant Joan de Déu, Esplugues de Llobregat, Barcelona, Spain; Takeda Cambridge Ltd, Cambridge, UK; Centre for Omic Sciences, Rovira i Virgili University, Reus, Spain; Department of Electronic Engineering, Rovira i Virgili University, Tarragona, Spain; Metabolomics Platform, Spanish Biomedical Research Centre in Diabetes and Associated Metabolic Disorders, Madrid, Spain; Institute for Research in Biomedicine, Barcelona Institute of Science and Technology, Barcelona, Spain
FELLA funding source(s)
Supported by the Spanish Ministry of Economy and Competitiveness [BFU2012-39521, BFU2015-68354, TEC2014-60337-R, SAF2011-30578 and BFU2014-57466], the Spanish Biomedical Research Centre in Diabetes and Associated Metabolic Disorders (CIBERDEM) and the Networking Biomedical Research Centre in the subject area of Bioengineering, Biomaterials and Nanomedicine (CIBER-BBN), both initiatives of Instituto de Investigacion Carlos III (ISCIII), the Finnish Cultural Society Fellowship and the AGAUR FI-scholarship programme.

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