FESD specifications


Unique identifier OMICS_21040
Alternative name Functional Element SNPs Database
Restrictions to use None
Database management system MySQL
Community driven No
Data access Browse
User data submission Not allowed
Maintained No


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Publication for Functional Element SNPs Database

FESD citations


Interactions between Paraoxonase 1 Genetic Polymorphisms and Smoking and Their Effects on Oxidative Stress and Lung Cancer Risk in a South Korean Population

PLoS One
PMCID: 4350985
PMID: 25741997
DOI: 10.1371/journal.pone.0119100
call_split See protocol

[…] The candidate SNPs (single nucleotide polymorphisms) were selected from 3 public databases: the International HapMap Project database (, the Functional Element SNPs database ( [], and the SNPinfo Web Server ( The selection criteria were as follows: (i) haplotype-t […]


Single Nucleotide Polymorphisms in the Wnt and BMP Pathways and Colorectal Cancer Risk in a Spanish Cohort

PLoS One
PMCID: 2936577
PMID: 20844743
DOI: 10.1371/journal.pone.0012673
call_split See protocol

[…] least two independent validation criteria as established in dbSNP . This included all exonic variants selected with Pupasuite and gene-regulatory regions in cis (5′or 3′ UTR ends), as defined by the FESD web browser . 5′UTR variants were only included when they complied to the abovementioned criteria and were presumed to be in the potential binding site of a known transctiptional binding factor. […]

FESD institution(s)
National Genome Information Center, Daejeon, Korea; Interdisciplinary Program in Bioinformatics, Seoul National University, Seoul, Korea; Center for Plant Molecular Genetics and Breeding Research, Seoul National University, Seoul, Korea
FESD funding source(s)
Supported by a grant from the KRIBB Research Initiative Program and in part by the Korean HapMap Project from the Korea Ministry of Science & Technology.

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