Dataset features

Specifications


Dataset type: Expression profiling by high throughput sequencing, Other
Number of samples: 14
Release date: Jan 7 2019
Last update date: Feb 19 2019
Access: Public
Dataset link Translation control of the immune checkpoint in cancer and its therapeutic targeting

Experimental Protocol


To identify the transcripts specifically translated in primary liver tumors in MYC; KRAS(G12D) and KRAS(G12D) mice, we first carefully micro-dissected primary liver tumor nodules in MYC; KRAS(G12D) and KRAS(G12D) mice as well as wildtype (WT) controls. We sequenced total mRNAs (2 replicates each) and ribosome-protected mRNA fragments (RPFs) using ribosome profiling (2 replicates each) to generate genome-wide transcriptional and translational landscapes, respectively.

Repositories


GEO

GSE105147

ENA

SRP120478

BioProject

PRJNA414959

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