Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 11
Release date: Dec 1 2016
Last update date: Feb 28 2017
Access: Public
Computational protocol: Blast2GO, PSORTb, antiSMASH, Pfam
Dataset link Influence of chitin on the transcriptome of Vibrio coralliilyticus S2052 and Photobacterium galatheae S2753 (P. galatheae)

Experimental Protocol


Each strain was grown on two carbon sources (glucose G and chitin C). RNA was extracted at two time points: late exponential phase (1*10^8 CFU/ml) and stationary phase (24 hours from inoculation). For each strain in each condition, at 3 biological replicates were analyzed, unless the QC led us to discard one replicate (so at least two biological replicates were analyzed for each strain in each condition)

Repositories


GEO

GSE80782

ENA

SRP074142

BioProject

PRJNA319974

Download


Dataset Statistics

info

Citations per year

Dataset publication