FFGC specifications

Information


Unique identifier OMICS_24735
Name FFGC
Alternative name Family Free Genome Comparison
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS
Programming languages Python
Computer skills Advanced
Version 0.3
Stability Stable
Requirements
BioPython, NetworkX, PyYAML
Source code URL https://bibiserv.cebitec.uni-bielefeld.de/resources/download/ffgc/ffgc_v0.3.src.tar.gz
Maintained Yes

Download


download.png
download.png

Versioning


No version available

FFGC citation

library_books

The gene family free median of three

2017
PMCID: 5446766
PMID: 28559921
DOI: 10.1186/s13015-017-0106-z

[…] Our algorithms have been implemented in Python and require CPLEX; they are freely available as part of the family-free genome comparison tool FFGC downloadable at http://bibiserv.cebitec.uni-bielefeld.de/ffgc.In subsequent analyses, gene similarities are based on local alignment hits identified with BLASTP on protein sequences using an e-va […]

FFGC reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review FFGC