FIDEA pipeline

FIDEA specifications

Information


Unique identifier OMICS_01539
Name FIDEA
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Publication for FIDEA

FIDEA IN pipelines

 (2)
2016
PMCID: 5099522
PMID: 27877172
DOI: 10.3389/fmicb.2016.01786

[…] genes and transcripts whose |log2 (foldchange)|≥ 1 and adjusted p-value < 0.05 (fdr adjusted with benjamini–hochberg) were picked as significant ones., the enrichment analysis was performed with fidea2 (d’andrea et al., 2013), and both up-regulated and down-regulated genes were considered. a threshold of 0.05 for q-value (fdr adjusted with benjamini–hochberg) was used to select significant […]

2016
PMCID: 5099522
PMID: 27877172
DOI: 10.3389/fmicb.2016.01786

[…] by the grants from the national natural science foundation of china (31330005 and 20875061)., http://support.illumina.com/sequencing/sequencing_software/igenome.html , http://www.biocomputing.it/fidea , http://www-huber.embl.de/users/anders/htseq/ , http://bioinfogp.cnb.csic.es/tools/venny/index.html , http://www.informatics.jax.org/ , the supplementary material for this article […]

FIDEA institution(s)
Department of Physics, Sapienza University, Rome, Italy

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